Peterlongo, Pierre: search on Z-Library

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1

Discovering Millions of Plankton Genomic Markers from the Atlantic Ocean and the Mediterranean Sea

Arif, Majda, Gauthier, Jérémy, Sugier, Kevin, Iudicone, Daniele, Jaillon, Olivier, Wincker, Patrick, Peterlongo, Pierre, Madoui, Mohammed-Amin

Journal:

Molecular Ecology Resources

Year:

2018

Language:

english

File:

PDF, 1.16 MB

english, 2018

2

IN-PLACE UPDATE OF SUFFIX ARRAY WHILE RECODING WORDS

GALLÉ, MATTHIAS, PETERLONGO, PIERRE, COSTE, FRANÇOIS

Journal:

International Journal of Foundations of Computer Science

Year:

2009

Language:

english

File:

PDF, 388 KB

english, 2009

3

Lossless filter for multiple repeats with bounded edit distance

Pierre Peterlongo, Gustavo Akio Tominaga Sacomoto…

Journal:

Algorithms for Molecular Biology

Year:

2009

Language:

english

File:

PDF, 597 KB

english, 2009

4

Investigating populationâscale allelic differential expression in wild populations of Oithona similis (Cyclopoida, Claus, 1866)

LasoâJadart, Romuald, Sugier, Kevin, Petit, Emmanuelle, Labadie, Karine, Peterlongo, Pierre, Ambroise, Christophe, Wincker, Patrick, Jamet, JeanâLouis, Madoui, MohammedâAmin

Journal:

Ecology and Evolution

Year:

2020

File:

PDF, 1.39 MB

2020

5

KISSPLICE: de-novo calling alternative splicing events from RNA-seq data

Gustavo AT Sacomoto, Janice Kielbassa, Rayan Chikhi, Raluca Uricaru, Pavlos Antoniou, Marie-France Sagot, Pierre Peterlongo, Vincent Lacroix

Journal:

BMC Bioinformatics

Year:

2012

Language:

english

File:

PDF, 697 KB

english, 2012

6

Optimal neighborhood indexing for protein similarity search

Pierre Peterlongo, Laurent Noé, Dominique Lavenier, Van Hoa Nguyen, Gregory Kucherov, Mathieu Giraud

Journal:

BMC Bioinformatics

Year:

2008

Language:

english

File:

PDF, 1.00 MB

english, 2008

7

Finding all maximal perfect haplotype blocks in linear time

Alanko, Jarno, Bannai, Hideo, Cazaux, Bastien, Peterlongo, Pierre, Stoye, Jens

Journal:

Algorithms for Molecular Biology

Year:

2020

File:

PDF, 1.72 MB

2020

8

Toward perfect reads: self-correction of short reads via mapping on de Bruijn graphs

Limasset, Antoine, Flot, Jean-François, Peterlongo, Pierre

Journal:

Year:

2019

File:

PDF, 76 KB

2019

9

Read mapping on de Bruijn graphs

Limasset, Antoine, Cazaux, Bastien, Rivals, Eric, Peterlongo, Pierre

Journal:

BMC Bioinformatics

Year:

2016

Language:

english

File:

PDF, 1.16 MB

english, 2016

10

SNP discovery and genetic mapping using genotyping by sequencing of whole genome genomic DNA from a pea RIL population

Boutet, Gilles, Alves Carvalho, Susete, Falque, Matthieu, Peterlongo, Pierre, Lhuillier, Emeline, Bouchez, Olivier, Lavaud, Clément, Pilet-Nayel, Marie-Laure, Rivière, Nathalie, Baranger, Alain

Journal:

Year:

2016

Language:

english

File:

PDF, 1.30 MB

english, 2016

11

SimkaMin: fast and resource frugal de novo comparative metagenomics

Benoit, Gaetan, Mariadassou, Mahendra, Robin, Stéphane, Schbath, Sophie, Peterlongo, Pierre, Lemaitre, Claire, Hancock, John

Journal:

Year:

2019

Language:

english

File:

PDF, 210 KB

english, 2019

12

Lossless filter for multiple repetitions with Hamming distance

Pierre Peterlongo, Nadia Pisanti, Frédéric Boyer, Alair Pereira do Lago, Marie-France Sagot

Journal:

Journal of Discrete Algorithms

Year:

2008

Language:

english

File:

PDF, 296 KB

english, 2008

13

INDEXING GAPPED-FACTORS USING A TREE

PETERLONGO, PIERRE, ALLALI, JULIEN, SAGOT, MARIE-FRANCE

Journal:

International Journal of Foundations of Computer Science

Year:

2008

Language:

english

File:

PDF, 842 KB

english, 2008

14

A resource-frugal probabilistic dictionary and applications in bioinformatics

Marchet, Camille, Lecompte, Lolita, Limasset, Antoine, Bittner, Lucie, Peterlongo, Pierre

Journal:

Discrete Applied Mathematics

Year:

2018

Language:

english

File:

PDF, 392 KB

english, 2018

15

SVJedi: Genotyping structural variations with long reads

Lecompte, Lolita, Peterlongo, Pierre, Lavenier, Dominique, Lemaitre, Claire, Robinson, Peter

Journal:

Year:

2020

File:

PDF, 1.53 MB

2020

16

Rime: Repeat identification

Federico, Maria, Peterlongo, Pierre, Pisanti, Nadia, Sagot, Marie-France

Journal:

Discrete Applied Mathematics

Year:

2014

Language:

english

File:

PDF, 467 KB

english, 2014

17

[IEEE 2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Belfast, United Kingdom (2014.11.2-2014.11.5)] 2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Commet: Comparing and combining multiple metagenomic datasets

Maillet, Nicolas, Collet, Guillaume, Vannier, Thomas, Lavenier, Dominique, Peterlongo, Pierre

Year:

2014

Language:

english

File:

PDF, 585 KB

english, 2014

18

Mapsembler, targeted and micro assembly of large NGS datasets on a desktop computer

Pierre Peterlongo, Rayan Chikhi

Journal:

BMC Bioinformatics

Year:

2012

Language:

english

File:

PDF, 11.24 MB

english, 2012

19

De novo clustering of long reads by gene from transcriptomics data

Marchet, Camille, Lecompte, Lolita, Silva, Corinne Da, Cruaud, Corinne, Aury, Jean-Marc, Nicolas, Jacques, Peterlongo, Pierre

Journal:

Nucleic Acids Research

Year:

2018

Language:

english

File:

PDF, 1.42 MB

english, 2018

20

Cytosine methylation of mature microRNAs inhibits their functions and is associated with poor prognosis in glioblastoma multiforme

Cheray, Mathilde, Etcheverry, Amandine, Jacques, Camille, Pacaud, Romain, Bougras-Cartron, Gwenola, Aubry, Marc, Denoual, Florent, Peterlongo, Pierre, Nadaradjane, Arulraj, Briand, JosÃ©phine, Akcha,

Journal:

Molecular Cancer

Year:

2020

Language:

english

File:

PDF, 2.78 MB

english, 2020

21

A de novo approach to disentangle partner identity and function in holobiont systems

Meng, Arnaud, Marchet, Camille, Corre, Erwan, Peterlongo, Pierre, Alberti, Adriana, Da Silva, Corinne, Wincker, Patrick, Pelletier, Eric, Probert, Ian, Decelle, Johan, Le Crom, Stéphane, Not, Fabrice,

Journal:

Year:

2018

Language:

english

File:

PDF, 1.35 MB

english, 2018

22

Toward perfect reads: self-correction of short reads via mapping on de Bruijn graphs

Limasset, Antoine, Flot, Jean-François, Peterlongo, Pierre, Valencia, Alfonso

Journal:

Year:

2019

Language:

english

File:

PDF, 1011 KB

english, 2019

23

A FIRST APPROACH TO FINDING COMMON MOTIFS WITH GAPS

ILIOPOULOS, COSTAS S., MCHUGH, JAMES, PETERLONGO, PIERRE, PISANTI, NADIA, RYTTER, WOJCIECH, SAGOT, MARIE-FRANCE

Journal:

International Journal of Foundations of Computer Science

Year:

2005

Language:

english

File:

PDF, 482 KB

english, 2005

24

ELECTOR: evaluator for long reads correction methods

Marchet, Camille, Morisse, Pierre, Lecompte, Lolita, Lefebvre, Arnaud, Lecroq, Thierry, Peterlongo, Pierre, Limasset, Antoine

Journal:

NAR Genomics and Bioinformatics

Year:

2020

File:

PDF, 856 KB

2020

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